Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFRAP16234 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PDGFRAP16234 AL671277.1-201ENST00000429656 993 ntBASIC17.21■□□□□ 0.35
PDGFRAP16234 AC093724.1-201ENST00000448659 1027 ntBASIC17.21■□□□□ 0.35
PDGFRAP16234 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFRAP16234 RARRES2P8-201ENST00000566335 367 ntBASIC17.21■□□□□ 0.35
PDGFRAP16234 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
PDGFRAP16234 AL596442.2-201ENST00000610240 980 ntBASIC17.21■□□□□ 0.35
PDGFRAP16234 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFRAP16234 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PDGFRAP16234 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDGFRAP16234 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
PDGFRAP16234 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFRAP16234 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PDGFRAP16234 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.21■□□□□ 0.34
PDGFRAP16234 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDGFRAP16234 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.21■□□□□ 0.34
PDGFRAP16234 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
PDGFRAP16234 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PDGFRAP16234 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PDGFRAP16234 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
PDGFRAP16234 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFRAP16234 U82695.1-201ENST00000635752 1889 ntBASIC17.2■□□□□ 0.34
PDGFRAP16234 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 AC073439.1-201ENST00000624121 1774 ntBASIC17.2■□□□□ 0.34
PDGFRAP16234 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PDGFRAP16234 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 AC026691.1-201ENST00000602502 2017 ntBASIC17.2■□□□□ 0.34
PDGFRAP16234 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 DNAJB3-202ENST00000449667 1266 ntBASIC17.2■□□□□ 0.34
PDGFRAP16234 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFRAP16234 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFRAP16234 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFRAP16234 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PDGFRAP16234 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFRAP16234 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.2■□□□□ 0.34
PDGFRAP16234 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFRAP16234 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDGFRAP16234 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFRAP16234 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.19■□□□□ 0.34
PDGFRAP16234 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDGFRAP16234 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PDGFRAP16234 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDGFRAP16234 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.19■□□□□ 0.34
PDGFRAP16234 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 AL355306.1-201ENST00000415580 579 ntBASIC17.19■□□□□ 0.34
PDGFRAP16234 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDGFRAP16234 ACTG1P14-201ENST00000446382 1122 ntBASIC17.19■□□□□ 0.34
PDGFRAP16234 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFRAP16234 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFRAP16234 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms