Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC22.3■■□□□ 1.16
CHD2O14647 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHD2O14647 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHD2O14647 AL590640.2-201ENST00000457038 527 ntBASIC22.3■■□□□ 1.16
CHD2O14647 AKR7A2P1-201ENST00000460134 915 ntBASIC22.3■■□□□ 1.16
CHD2O14647 KRT18P43-201ENST00000469825 1281 ntBASIC22.3■■□□□ 1.16
CHD2O14647 ADM-202ENST00000524948 584 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC22.3■■□□□ 1.16
CHD2O14647 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC22.3■■□□□ 1.16
CHD2O14647 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CHD2O14647 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD2O14647 AL121723.1-201ENST00000445194 1519 ntBASIC22.3■■□□□ 1.16
CHD2O14647 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CHD2O14647 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 BNIP3P1-202ENST00000550043 1585 ntBASIC22.29■■□□□ 1.16
CHD2O14647 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CHD2O14647 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD2O14647 CSH2-202ENST00000345366 598 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD2O14647 C2orf27AP3-201ENST00000434123 579 ntBASIC22.29■■□□□ 1.16
CHD2O14647 CNN2P10-201ENST00000443067 918 ntBASIC22.29■■□□□ 1.16
CHD2O14647 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD2O14647 AC026410.3-201ENST00000514280 936 ntBASIC22.29■■□□□ 1.16
CHD2O14647 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.29■■□□□ 1.16
CHD2O14647 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD2O14647 AC097724.1-201ENST00000609581 426 ntBASIC22.29■■□□□ 1.16
CHD2O14647 AL354718.3-201ENST00000616414 581 ntBASIC22.29■■□□□ 1.16
CHD2O14647 CR382287.1-201ENST00000623954 586 ntBASIC22.29■■□□□ 1.16
CHD2O14647 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD2O14647 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD2O14647 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CHD2O14647 RNF165-205ENST00000588679 2904 ntBASIC22.29■■□□□ 1.16
CHD2O14647 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD2O14647 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 AC006001.1-201ENST00000325130 474 ntBASIC22.29■■□□□ 1.16
CHD2O14647 BTBD6P1-201ENST00000412176 1267 ntBASIC22.29■■□□□ 1.16
CHD2O14647 APOA2-204ENST00000464492 530 ntTSL 3 BASIC22.29■■□□□ 1.16
CHD2O14647 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHD2O14647 AC138951.2-201ENST00000623455 1161 ntBASIC22.29■■□□□ 1.16
CHD2O14647 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.28■■□□□ 1.16
CHD2O14647 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC22.28■■□□□ 1.16
CHD2O14647 UPF3AP2-201ENST00000457924 1132 ntBASIC22.28■■□□□ 1.16
CHD2O14647 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
CHD2O14647 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC22.28■■□□□ 1.16
CHD2O14647 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC22.28■■□□□ 1.16
CHD2O14647 MIR6727-201ENST00000620702 65 ntBASIC22.28■■□□□ 1.16
CHD2O14647 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHD2O14647 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
CHD2O14647 DRD5P1-201ENST00000456605 1438 ntBASIC22.28■■□□□ 1.16
CHD2O14647 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHD2O14647 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC22.28■■□□□ 1.16
CHD2O14647 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC22.28■■□□□ 1.16
CHD2O14647 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD2O14647 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
CHD2O14647 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22.27■■□□□ 1.16
CHD2O14647 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC22.27■■□□□ 1.16
CHD2O14647 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC22.27■■□□□ 1.16
CHD2O14647 MIR3619-201ENST00000579667 83 ntBASIC22.27■■□□□ 1.16
CHD2O14647 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
CHD2O14647 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD2O14647 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD2O14647 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CHD2O14647 AC018735.1-201ENST00000437208 1502 ntBASIC22.27■■□□□ 1.15
CHD2O14647 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CHD2O14647 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC22.27■■□□□ 1.15
CHD2O14647 RPS3-201ENST00000278572 907 ntTSL 3 BASIC22.27■■□□□ 1.15
CHD2O14647 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
CHD2O14647 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms