Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 FO393414.2-201ENST00000405153 598 ntBASIC22.24■■□□□ 1.15
NINLQ9Y2I6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AC135586.1-201ENST00000539323 574 ntBASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.24■■□□□ 1.15
NINLQ9Y2I6 MIR6069-201ENST00000620069 79 ntBASIC22.24■■□□□ 1.15
NINLQ9Y2I6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 AC012313.1-201ENST00000593393 3059 ntBASIC22.23■■□□□ 1.15
NINLQ9Y2I6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NINLQ9Y2I6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 SDHAP3-202ENST00000515467 728 ntBASIC22.22■■□□□ 1.15
NINLQ9Y2I6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AC044860.1-202ENST00000559481 777 ntBASIC22.22■■□□□ 1.15
NINLQ9Y2I6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AL132655.2-201ENST00000596276 594 ntBASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AC004233.3-201ENST00000607794 1269 ntBASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.22■■□□□ 1.15
NINLQ9Y2I6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 CU639417.3-201ENST00000624240 1404 ntBASIC22.21■■□□□ 1.15
NINLQ9Y2I6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms