Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4bQ8BGE6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Gm38223-201ENSMUST00000194484 695 ntBASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4bQ8BGE6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atg4bQ8BGE6 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms