Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC012317.2-201ENST00000623305 2251 ntBASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FNTAP2-201ENST00000430308 634 ntBASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 AC138028.6-201ENST00000616106 1482 ntBASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.78■□□□□ 0.12
RSPO4Q2I0M5 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC016694.1-201ENST00000434179 700 ntBASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 SCARNA20.5-201ENST00000516991 142 ntBASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC024267.1-201ENST00000582320 895 ntBASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 AC025048.3-201ENST00000590609 569 ntBASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 LINC01451-201ENST00000623792 534 ntBASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RSPO4Q2I0M5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms