Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 USP40-206ENST00000443711 628 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC136604.1-201ENST00000418535 575 ntBASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AC000095.1-201ENST00000603208 874 ntBASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
CDC42BPBQ9Y5S2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 BRWD1P1-201ENST00000401091 371 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 AC134915.1-201ENST00000426461 574 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 VDAC1P7-201ENST00000462417 847 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 AC243960.2-201ENST00000600996 747 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 AL139099.5-201ENST00000635274 300 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 AC009053.2-201ENST00000563701 2365 ntBASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CDC42BPBQ9Y5S2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AC105020.1-201ENST00000435356 2205 ntBASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 AC107373.2-201ENST00000607735 490 ntBASIC24.3■■□□□ 1.48
CDC42BPBQ9Y5S2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 RHOXF1P1-202ENST00000635473 501 ntBASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPBQ9Y5S2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 REXO1L8P-201ENST00000604378 1897 ntBASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 AC026954.1-201ENST00000429771 1293 ntBASIC24.28■■□□□ 1.48
CDC42BPBQ9Y5S2 POU5F1P6-201ENST00000466990 990 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms