Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 FAM86MP-201ENST00000340703 885 ntBASIC16.68■□□□□ 0.26
NOTCH4Q99466 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC018665.1-201ENST00000622927 1362 ntBASIC16.67■□□□□ 0.26
NOTCH4Q99466 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 CROCCP4-201ENST00000457096 498 ntBASIC16.67■□□□□ 0.26
NOTCH4Q99466 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AL606495.2-201ENST00000605867 535 ntBASIC16.67■□□□□ 0.26
NOTCH4Q99466 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH4Q99466 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.67■□□□□ 0.26
NOTCH4Q99466 PDIA3P1-201ENST00000471856 1510 ntBASIC16.67■□□□□ 0.26
NOTCH4Q99466 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 KRT18P64-201ENST00000434946 1219 ntBASIC16.66■□□□□ 0.26
NOTCH4Q99466 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 AC092552.1-201ENST00000547243 906 ntBASIC16.66■□□□□ 0.26
NOTCH4Q99466 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 LINC01144-201ENST00000626198 1710 ntBASIC16.66■□□□□ 0.26
NOTCH4Q99466 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH4Q99466 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
NOTCH4Q99466 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 BNIP3P42-201ENST00000454982 569 ntBASIC16.65■□□□□ 0.26
NOTCH4Q99466 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.65■□□□□ 0.26
NOTCH4Q99466 BNIP3P29-201ENST00000598302 571 ntBASIC16.65■□□□□ 0.26
NOTCH4Q99466 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.65■□□□□ 0.26
NOTCH4Q99466 AC011447.5-201ENST00000616168 564 ntBASIC16.65■□□□□ 0.26
NOTCH4Q99466 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
NOTCH4Q99466 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.65■□□□□ 0.26
NOTCH4Q99466 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH4Q99466 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NOTCH4Q99466 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms