Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 KRT8P23-201ENST00000560090 1207 ntBASIC13.3□□□□□ -0.28
LINC00311Q8N616 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 AC026120.1-201ENST00000611536 926 ntBASIC13.3□□□□□ -0.28
LINC00311Q8N616 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HTR5BP-201ENST00000430851 1154 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 SPDYE11-202ENST00000450699 704 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 AC243562.1-201ENST00000560672 389 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 SPDYE9P-201ENST00000570642 692 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 AC024267.1-201ENST00000582320 895 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 AC027307.2-201ENST00000591252 911 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SPDYE10P-202ENST00000612005 668 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 SPDYE8P-202ENST00000612377 668 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 SPTSSB-204ENST00000617024 1292 ntBASIC13.29□□□□□ -0.28
LINC00311Q8N616 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00311Q8N616 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 AL603832.2-201ENST00000566195 2125 ntBASIC13.28□□□□□ -0.28
LINC00311Q8N616 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00311Q8N616 AP000347.1-202ENST00000435868 847 ntBASIC13.28□□□□□ -0.28
LINC00311Q8N616 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 AL138918.1-201ENST00000568306 659 ntBASIC13.28□□□□□ -0.28
LINC00311Q8N616 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00311Q8N616 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms