Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp6v1c1Q9Z1G3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6v1c1Q9Z1G3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6v1c1Q9Z1G3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp6v1c1Q9Z1G3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Atp6v1c1Q9Z1G3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Atp6v1c1Q9Z1G3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.89■□□□□ 0.93
Atp6v1c1Q9Z1G3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atp6v1c1Q9Z1G3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp6v1c1Q9Z1G3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp6v1c1Q9Z1G3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp6v1c1Q9Z1G3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atp6v1c1Q9Z1G3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Atp6v1c1Q9Z1G3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Atp6v1c1Q9Z1G3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atp6v1c1Q9Z1G3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.84■□□□□ 0.93
Atp6v1c1Q9Z1G3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.83■□□□□ 0.93
Atp6v1c1Q9Z1G3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atp6v1c1Q9Z1G3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atp6v1c1Q9Z1G3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atp6v1c1Q9Z1G3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Atp6v1c1Q9Z1G3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atp6v1c1Q9Z1G3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atp6v1c1Q9Z1G3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atp6v1c1Q9Z1G3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.81■□□□□ 0.92
Atp6v1c1Q9Z1G3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atp6v1c1Q9Z1G3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atp6v1c1Q9Z1G3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atp6v1c1Q9Z1G3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Atp6v1c1Q9Z1G3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp6v1c1Q9Z1G3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp6v1c1Q9Z1G3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp6v1c1Q9Z1G3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atp6v1c1Q9Z1G3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp6v1c1Q9Z1G3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1c1Q9Z1G3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1c1Q9Z1G3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Atp6v1c1Q9Z1G3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1c1Q9Z1G3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.76■□□□□ 0.91
Atp6v1c1Q9Z1G3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1c1Q9Z1G3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Atp6v1c1Q9Z1G3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Atp6v1c1Q9Z1G3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms