Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Gpc6Q9R087 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gpc6Q9R087 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gpc6Q9R087 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gpc6Q9R087 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.81■□□□□ 0.76
Gpc6Q9R087 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gpc6Q9R087 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gpc6Q9R087 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gpc6Q9R087 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gpc6Q9R087 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gpc6Q9R087 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gpc6Q9R087 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gpc6Q9R087 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gpc6Q9R087 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gpc6Q9R087 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gpc6Q9R087 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gpc6Q9R087 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Gpc6Q9R087 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gpc6Q9R087 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
Gpc6Q9R087 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gpc6Q9R087 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.78■□□□□ 0.76
Gpc6Q9R087 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.78■□□□□ 0.76
Gpc6Q9R087 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gpc6Q9R087 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gpc6Q9R087 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gpc6Q9R087 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Gpc6Q9R087 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gpc6Q9R087 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gpc6Q9R087 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.77■□□□□ 0.76
Gpc6Q9R087 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gpc6Q9R087 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.76■□□□□ 0.75
Gpc6Q9R087 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gpc6Q9R087 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.76■□□□□ 0.75
Gpc6Q9R087 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gpc6Q9R087 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.76■□□□□ 0.75
Gpc6Q9R087 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gpc6Q9R087 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Gpc6Q9R087 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gpc6Q9R087 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gpc6Q9R087 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.71■□□□□ 0.75
Gpc6Q9R087 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.71■□□□□ 0.75
Gpc6Q9R087 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gpc6Q9R087 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.7■□□□□ 0.74
Gpc6Q9R087 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gpc6Q9R087 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gpc6Q9R087 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gpc6Q9R087 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gpc6Q9R087 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gpc6Q9R087 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.69■□□□□ 0.74
Gpc6Q9R087 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gpc6Q9R087 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.68■□□□□ 0.74
Gpc6Q9R087 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gpc6Q9R087 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 982.3 ms