Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Chd1lQ9CXF7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.22■■□□□ 1.47
Chd1lQ9CXF7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chd1lQ9CXF7 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.21■■□□□ 1.47
Chd1lQ9CXF7 Gm4799-201ENSMUST00000095396 657 ntBASIC24.21■■□□□ 1.47
Chd1lQ9CXF7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Chd1lQ9CXF7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Chd1lQ9CXF7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chd1lQ9CXF7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.19■■□□□ 1.46
Chd1lQ9CXF7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.19■■□□□ 1.46
Chd1lQ9CXF7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Chd1lQ9CXF7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chd1lQ9CXF7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chd1lQ9CXF7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chd1lQ9CXF7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Chd1lQ9CXF7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.18■■□□□ 1.46
Chd1lQ9CXF7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chd1lQ9CXF7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Chd1lQ9CXF7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.17■■□□□ 1.46
Chd1lQ9CXF7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Chd1lQ9CXF7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Chd1lQ9CXF7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Chd1lQ9CXF7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.15■■□□□ 1.46
Chd1lQ9CXF7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Chd1lQ9CXF7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd1lQ9CXF7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Chd1lQ9CXF7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chd1lQ9CXF7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd1lQ9CXF7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd1lQ9CXF7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd1lQ9CXF7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd1lQ9CXF7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.13■■□□□ 1.45
Chd1lQ9CXF7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chd1lQ9CXF7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd1lQ9CXF7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd1lQ9CXF7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Terc-201ENSMUST00000082862 423 ntBASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd1lQ9CXF7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chd1lQ9CXF7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd1lQ9CXF7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.09■■□□□ 1.45
Chd1lQ9CXF7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chd1lQ9CXF7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Chd1lQ9CXF7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC24.08■■□□□ 1.45
Chd1lQ9CXF7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.08■■□□□ 1.44
Chd1lQ9CXF7 Iqck-206ENSMUST00000208658 2891 ntBASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms