Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ppp1r3eQ8BRJ4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.12■□□□□ 0.81
Ppp1r3eQ8BRJ4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.12■□□□□ 0.81
Ppp1r3eQ8BRJ4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ppp1r3eQ8BRJ4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp1r3eQ8BRJ4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ppp1r3eQ8BRJ4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ppp1r3eQ8BRJ4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ppp1r3eQ8BRJ4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ppp1r3eQ8BRJ4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ppp1r3eQ8BRJ4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Ppp1r3eQ8BRJ4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ppp1r3eQ8BRJ4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.06■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ppp1r3eQ8BRJ4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ppp1r3eQ8BRJ4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
Ppp1r3eQ8BRJ4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ppp1r3eQ8BRJ4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ppp1r3eQ8BRJ4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.03■□□□□ 0.8
Ppp1r3eQ8BRJ4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.03■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ppp1r3eQ8BRJ4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ppp1r3eQ8BRJ4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Ppp1r3eQ8BRJ4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ppp1r3eQ8BRJ4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20■□□□□ 0.79
Ppp1r3eQ8BRJ4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ppp1r3eQ8BRJ4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.98■□□□□ 0.79
Ppp1r3eQ8BRJ4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ppp1r3eQ8BRJ4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ppp1r3eQ8BRJ4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms