Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco3Q8BQM7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.56■□□□□ 0.4
Smco3Q8BQM7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco3Q8BQM7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smco3Q8BQM7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smco3Q8BQM7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smco3Q8BQM7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco3Q8BQM7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smco3Q8BQM7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Smco3Q8BQM7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smco3Q8BQM7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Smco3Q8BQM7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smco3Q8BQM7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smco3Q8BQM7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smco3Q8BQM7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smco3Q8BQM7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smco3Q8BQM7 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smco3Q8BQM7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.49■□□□□ 0.39
Smco3Q8BQM7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smco3Q8BQM7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smco3Q8BQM7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
Smco3Q8BQM7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smco3Q8BQM7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smco3Q8BQM7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms