Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh20Q8BIZ0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh20Q8BIZ0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh20Q8BIZ0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh20Q8BIZ0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh20Q8BIZ0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.79■□□□□ 0.92
Pcdh20Q8BIZ0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh20Q8BIZ0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.79■□□□□ 0.92
Pcdh20Q8BIZ0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh20Q8BIZ0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh20Q8BIZ0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh20Q8BIZ0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh20Q8BIZ0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh20Q8BIZ0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh20Q8BIZ0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh20Q8BIZ0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh20Q8BIZ0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh20Q8BIZ0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh20Q8BIZ0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh20Q8BIZ0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh20Q8BIZ0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdh20Q8BIZ0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdh20Q8BIZ0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh20Q8BIZ0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh20Q8BIZ0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh20Q8BIZ0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.68■□□□□ 0.9
Pcdh20Q8BIZ0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh20Q8BIZ0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh20Q8BIZ0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh20Q8BIZ0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms