Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RfflQ6ZQM0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RfflQ6ZQM0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RfflQ6ZQM0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RfflQ6ZQM0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RfflQ6ZQM0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RfflQ6ZQM0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RfflQ6ZQM0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RfflQ6ZQM0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RfflQ6ZQM0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RfflQ6ZQM0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RfflQ6ZQM0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RfflQ6ZQM0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RfflQ6ZQM0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
RfflQ6ZQM0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RfflQ6ZQM0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RfflQ6ZQM0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RfflQ6ZQM0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RfflQ6ZQM0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RfflQ6ZQM0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RfflQ6ZQM0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RfflQ6ZQM0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RfflQ6ZQM0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RfflQ6ZQM0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.71■□□□□ 0.91
RfflQ6ZQM0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
RfflQ6ZQM0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
RfflQ6ZQM0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RfflQ6ZQM0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RfflQ6ZQM0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.68■□□□□ 0.9
RfflQ6ZQM0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RfflQ6ZQM0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RfflQ6ZQM0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RfflQ6ZQM0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RfflQ6ZQM0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
RfflQ6ZQM0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RfflQ6ZQM0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.66■□□□□ 0.9
RfflQ6ZQM0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.65■□□□□ 0.9
RfflQ6ZQM0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RfflQ6ZQM0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RfflQ6ZQM0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RfflQ6ZQM0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RfflQ6ZQM0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.64■□□□□ 0.89
RfflQ6ZQM0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RfflQ6ZQM0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms