Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx9Q6XAS3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx9Q6XAS3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx9Q6XAS3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx9Q6XAS3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx9Q6XAS3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx9Q6XAS3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx9Q6XAS3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.39■■□□□ 1.02
Ssx9Q6XAS3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ssx9Q6XAS3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ssx9Q6XAS3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx9Q6XAS3 Gm11175-201ENSMUST00000116172 543 ntBASIC21.37■■□□□ 1.01
Ssx9Q6XAS3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx9Q6XAS3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx9Q6XAS3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ssx9Q6XAS3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx9Q6XAS3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx9Q6XAS3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx9Q6XAS3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.33■■□□□ 1.01
Ssx9Q6XAS3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx9Q6XAS3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx9Q6XAS3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx9Q6XAS3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.32■■□□□ 1
Ssx9Q6XAS3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ssx9Q6XAS3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx9Q6XAS3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx9Q6XAS3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssx9Q6XAS3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssx9Q6XAS3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssx9Q6XAS3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Ssx9Q6XAS3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.31■■□□□ 1
Ssx9Q6XAS3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssx9Q6XAS3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx9Q6XAS3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx9Q6XAS3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.3■■□□□ 1
Ssx9Q6XAS3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx9Q6XAS3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx9Q6XAS3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.29■■□□□ 1
Ssx9Q6XAS3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.29■■□□□ 1
Ssx9Q6XAS3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.29■■□□□ 1
Ssx9Q6XAS3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.28■■□□□ 1
Ssx9Q6XAS3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ssx9Q6XAS3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ssx9Q6XAS3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Ssx9Q6XAS3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.26■□□□□ 0.99
Ssx9Q6XAS3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx9Q6XAS3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssx9Q6XAS3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Ssx9Q6XAS3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssx9Q6XAS3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssx9Q6XAS3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms