Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.42■□□□□ 0.38
Tgfbr1Q64729 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tgfbr1Q64729 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tgfbr1Q64729 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfbr1Q64729 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tgfbr1Q64729 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfbr1Q64729 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfbr1Q64729 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.39■□□□□ 0.37
Tgfbr1Q64729 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfbr1Q64729 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfbr1Q64729 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfbr1Q64729 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Gm22567-201ENSMUST00000175542 342 ntBASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.36■□□□□ 0.37
Tgfbr1Q64729 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr1Q64729 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr1Q64729 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.35■□□□□ 0.37
Tgfbr1Q64729 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfbr1Q64729 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr1Q64729 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr1Q64729 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr1Q64729 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfbr1Q64729 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tgfbr1Q64729 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr1Q64729 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr1Q64729 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr1Q64729 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfbr1Q64729 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tgfbr1Q64729 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.33■□□□□ 0.36
Tgfbr1Q64729 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tgfbr1Q64729 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
Tgfbr1Q64729 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfbr1Q64729 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tgfbr1Q64729 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms