Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7d-4Q5R1H9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav7d-4Q5R1H9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav7d-4Q5R1H9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav7d-4Q5R1H9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7d-4Q5R1H9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7d-4Q5R1H9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7d-4Q5R1H9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Zfp131-205ENSMUST00000223812 663 ntBASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7d-4Q5R1H9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7d-4Q5R1H9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav7d-4Q5R1H9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7d-4Q5R1H9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav7d-4Q5R1H9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7d-4Q5R1H9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7d-4Q5R1H9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7d-4Q5R1H9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7d-4Q5R1H9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7d-4Q5R1H9 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.29■□□□□ 0.2
Trav7d-4Q5R1H9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7d-4Q5R1H9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7d-4Q5R1H9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav7d-4Q5R1H9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7d-4Q5R1H9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7d-4Q5R1H9 Gm9397-201ENSMUST00000200125 605 ntBASIC16.27■□□□□ 0.2
Trav7d-4Q5R1H9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-4Q5R1H9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-4Q5R1H9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-4Q5R1H9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-4Q5R1H9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-4Q5R1H9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-4Q5R1H9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Iqck-206ENSMUST00000208658 2891 ntBASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-4Q5R1H9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-4Q5R1H9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms