Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1bP97952 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn1bP97952 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.53■□□□□ 0.72
Scn1bP97952 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.53■□□□□ 0.72
Scn1bP97952 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1bP97952 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn1bP97952 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1bP97952 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn1bP97952 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.52■□□□□ 0.71
Scn1bP97952 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1bP97952 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn1bP97952 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.51■□□□□ 0.71
Scn1bP97952 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1bP97952 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1bP97952 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scn1bP97952 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn1bP97952 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Scn1bP97952 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.51■□□□□ 0.71
Scn1bP97952 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn1bP97952 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.5■□□□□ 0.71
Scn1bP97952 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Scn1bP97952 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1bP97952 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1bP97952 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1bP97952 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1bP97952 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn1bP97952 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Scn1bP97952 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1bP97952 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1bP97952 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.49■□□□□ 0.71
Scn1bP97952 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.49■□□□□ 0.71
Scn1bP97952 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.49■□□□□ 0.71
Scn1bP97952 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.49■□□□□ 0.71
Scn1bP97952 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1bP97952 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.49■□□□□ 0.71
Scn1bP97952 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1bP97952 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn1bP97952 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1bP97952 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1bP97952 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1bP97952 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1bP97952 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn1bP97952 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1bP97952 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1bP97952 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1bP97952 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1bP97952 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn1bP97952 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn1bP97952 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Scn1bP97952 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Gm6821-201ENSMUST00000107540 542 ntBASIC19.46■□□□□ 0.71
Scn1bP97952 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn1bP97952 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Scn1bP97952 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1bP97952 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1bP97952 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1bP97952 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1bP97952 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1bP97952 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1bP97952 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.44■□□□□ 0.7
Scn1bP97952 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Scn1bP97952 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1bP97952 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1bP97952 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1bP97952 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1bP97952 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1bP97952 Gm22567-201ENSMUST00000175542 342 ntBASIC19.41■□□□□ 0.7
Scn1bP97952 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1bP97952 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1bP97952 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Scn1bP97952 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Scn1bP97952 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1bP97952 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scn1bP97952 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Scn1bP97952 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.4■□□□□ 0.7
Scn1bP97952 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1bP97952 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.4■□□□□ 0.7
Scn1bP97952 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1bP97952 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1bP97952 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn1bP97952 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn1bP97952 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn1bP97952 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn1bP97952 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms