Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gli1P47806 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli1P47806 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.78■□□□□ 0.92
Gli1P47806 Gm15039-201ENSMUST00000118914 875 ntBASIC20.78■□□□□ 0.92
Gli1P47806 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli1P47806 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli1P47806 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.77■□□□□ 0.92
Gli1P47806 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Gm9812-201ENSMUST00000061934 968 ntBASIC20.77■□□□□ 0.92
Gli1P47806 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gli1P47806 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Gli1P47806 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gli1P47806 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Gli1P47806 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gli1P47806 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.76■□□□□ 0.91
Gli1P47806 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.76■□□□□ 0.91
Gli1P47806 Gm10420-201ENSMUST00000121713 882 ntBASIC20.76■□□□□ 0.91
Gli1P47806 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli1P47806 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gli1P47806 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli1P47806 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli1P47806 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.75■□□□□ 0.91
Gli1P47806 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli1P47806 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli1P47806 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli1P47806 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Gm22567-201ENSMUST00000175542 342 ntBASIC20.74■□□□□ 0.91
Gli1P47806 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Gm5812-201ENSMUST00000061073 957 ntBASIC20.74■□□□□ 0.91
Gli1P47806 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli1P47806 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gli1P47806 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli1P47806 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gli1P47806 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gli1P47806 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.73■□□□□ 0.91
Gli1P47806 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli1P47806 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Gli1P47806 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli1P47806 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli1P47806 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli1P47806 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli1P47806 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli1P47806 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli1P47806 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gli1P47806 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gli1P47806 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.69■□□□□ 0.9
Gli1P47806 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Gli1P47806 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli1P47806 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
Gli1P47806 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.69■□□□□ 0.9
Gli1P47806 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli1P47806 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.69■□□□□ 0.9
Gli1P47806 Gm5921-201ENSMUST00000075898 882 ntBASIC20.69■□□□□ 0.9
Gli1P47806 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli1P47806 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli1P47806 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli1P47806 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gli1P47806 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gli1P47806 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli1P47806 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gli1P47806 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.68■□□□□ 0.9
Gli1P47806 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.68■□□□□ 0.9
Gli1P47806 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.68■□□□□ 0.9
Gli1P47806 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gli1P47806 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gli1P47806 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gli1P47806 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Gli1P47806 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli1P47806 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.67■□□□□ 0.9
Gli1P47806 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gli1P47806 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.66■□□□□ 0.9
Gli1P47806 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gli1P47806 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gli1P47806 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gli1P47806 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gli1P47806 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gli1P47806 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gli1P47806 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gli1P47806 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.65■□□□□ 0.9
Gli1P47806 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms