Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctla2aP12399 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctla2aP12399 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ctla2aP12399 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.29■□□□□ 0.68
Ctla2aP12399 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctla2aP12399 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ctla2aP12399 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctla2aP12399 Iqck-206ENSMUST00000208658 2891 ntBASIC19.28■□□□□ 0.68
Ctla2aP12399 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctla2aP12399 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctla2aP12399 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.28■□□□□ 0.68
Ctla2aP12399 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctla2aP12399 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctla2aP12399 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Ctla2aP12399 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctla2aP12399 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ctla2aP12399 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctla2aP12399 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.26■□□□□ 0.67
Ctla2aP12399 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctla2aP12399 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctla2aP12399 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.25■□□□□ 0.67
Ctla2aP12399 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctla2aP12399 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctla2aP12399 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctla2aP12399 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctla2aP12399 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctla2aP12399 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctla2aP12399 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ctla2aP12399 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.23■□□□□ 0.67
Ctla2aP12399 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctla2aP12399 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctla2aP12399 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ctla2aP12399 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Ctla2aP12399 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctla2aP12399 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctla2aP12399 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctla2aP12399 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ctla2aP12399 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctla2aP12399 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ctla2aP12399 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctla2aP12399 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla2aP12399 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla2aP12399 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ctla2aP12399 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.2■□□□□ 0.66
Ctla2aP12399 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla2aP12399 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla2aP12399 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctla2aP12399 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctla2aP12399 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla2aP12399 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla2aP12399 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.18■□□□□ 0.66
Ctla2aP12399 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla2aP12399 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla2aP12399 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla2aP12399 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla2aP12399 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla2aP12399 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla2aP12399 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla2aP12399 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla2aP12399 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla2aP12399 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ctla2aP12399 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctla2aP12399 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla2aP12399 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms