Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NefmP08553 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
NefmP08553 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.73■■■□□ 2.67
NefmP08553 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
NefmP08553 Gm20634-201ENSMUST00000090779 2956 ntBASIC31.73■■■□□ 2.67
NefmP08553 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
NefmP08553 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NefmP08553 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC31.72■■■□□ 2.67
NefmP08553 AC117769.4-201ENSMUST00000225679 685 ntBASIC31.72■■■□□ 2.67
NefmP08553 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NefmP08553 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NefmP08553 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.71■■■□□ 2.67
NefmP08553 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC31.71■■■□□ 2.67
NefmP08553 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
NefmP08553 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NefmP08553 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NefmP08553 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NefmP08553 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NefmP08553 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NefmP08553 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NefmP08553 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NefmP08553 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
NefmP08553 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
NefmP08553 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NefmP08553 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
NefmP08553 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
NefmP08553 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NefmP08553 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NefmP08553 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.68■■■□□ 2.66
NefmP08553 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.68■■■□□ 2.66
NefmP08553 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
NefmP08553 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
NefmP08553 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
NefmP08553 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
NefmP08553 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
NefmP08553 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
NefmP08553 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
NefmP08553 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NefmP08553 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
NefmP08553 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NefmP08553 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NefmP08553 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
NefmP08553 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC31.65■■■□□ 2.66
NefmP08553 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NefmP08553 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC31.65■■■□□ 2.66
NefmP08553 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NefmP08553 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC31.64■■■□□ 2.66
NefmP08553 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.64■■■□□ 2.66
NefmP08553 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NefmP08553 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC31.63■■■□□ 2.65
NefmP08553 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
NefmP08553 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.63■■■□□ 2.65
NefmP08553 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NefmP08553 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NefmP08553 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.62■■■□□ 2.65
NefmP08553 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
NefmP08553 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NefmP08553 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NefmP08553 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
NefmP08553 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NefmP08553 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
NefmP08553 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NefmP08553 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NefmP08553 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
NefmP08553 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC31.6■■■□□ 2.65
NefmP08553 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NefmP08553 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NefmP08553 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NefmP08553 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NefmP08553 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
NefmP08553 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NefmP08553 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NefmP08553 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
NefmP08553 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
NefmP08553 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NefmP08553 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
NefmP08553 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NefmP08553 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
NefmP08553 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.65
NefmP08553 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
NefmP08553 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NefmP08553 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
NefmP08553 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NefmP08553 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
NefmP08553 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
NefmP08553 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NefmP08553 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NefmP08553 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NefmP08553 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NefmP08553 Gm6311-201ENSMUST00000073790 878 ntBASIC31.54■■■□□ 2.64
NefmP08553 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
NefmP08553 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NefmP08553 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC31.53■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms