Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Gm44428-201ENSMUST00000204474 874 ntBASIC18.28■□□□□ 0.52
BC035044E0CXF8 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.28■□□□□ 0.52
BC035044E0CXF8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC035044E0CXF8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC035044E0CXF8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC035044E0CXF8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC035044E0CXF8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
BC035044E0CXF8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BC035044E0CXF8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BC035044E0CXF8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC035044E0CXF8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC035044E0CXF8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BC035044E0CXF8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BC035044E0CXF8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BC035044E0CXF8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.23■□□□□ 0.51
BC035044E0CXF8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BC035044E0CXF8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.23■□□□□ 0.51
BC035044E0CXF8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BC035044E0CXF8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BC035044E0CXF8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.23■□□□□ 0.51
BC035044E0CXF8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC035044E0CXF8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BC035044E0CXF8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BC035044E0CXF8 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.22■□□□□ 0.51
BC035044E0CXF8 Gm6311-201ENSMUST00000073790 878 ntBASIC18.22■□□□□ 0.51
BC035044E0CXF8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.22■□□□□ 0.51
BC035044E0CXF8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC035044E0CXF8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.21■□□□□ 0.51
BC035044E0CXF8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC035044E0CXF8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BC035044E0CXF8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.2■□□□□ 0.5
BC035044E0CXF8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC035044E0CXF8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC035044E0CXF8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC035044E0CXF8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC035044E0CXF8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC035044E0CXF8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC035044E0CXF8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.17■□□□□ 0.5
BC035044E0CXF8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC035044E0CXF8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms