Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trdv1A0A075B657 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trdv1A0A075B657 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv1A0A075B657 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv1A0A075B657 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv1A0A075B657 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trdv1A0A075B657 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv1A0A075B657 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv1A0A075B657 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv1A0A075B657 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trdv1A0A075B657 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trdv1A0A075B657 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.27■□□□□ 0.2
Trdv1A0A075B657 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdv1A0A075B657 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trdv1A0A075B657 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trdv1A0A075B657 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trdv1A0A075B657 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Gm7432-201ENSMUST00000210343 879 ntBASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv1A0A075B657 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trdv1A0A075B657 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv1A0A075B657 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Gm11599-201ENSMUST00000118720 878 ntBASIC16.23■□□□□ 0.19
Trdv1A0A075B657 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms