Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4-4-dv10A0A075B651 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-4-dv10A0A075B651 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4-4-dv10A0A075B651 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm11599-201ENSMUST00000118720 878 ntBASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.71■□□□□ 0.27
Trav4-4-dv10A0A075B651 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Trav4-4-dv10A0A075B651 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4-4-dv10A0A075B651 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4-4-dv10A0A075B651 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-4-dv10A0A075B651 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-4-dv10A0A075B651 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav4-4-dv10A0A075B651 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.68■□□□□ 0.26
Trav4-4-dv10A0A075B651 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-4-dv10A0A075B651 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-4-dv10A0A075B651 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Gm44428-201ENSMUST00000204474 874 ntBASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-4-dv10A0A075B651 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-4-dv10A0A075B651 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-4-dv10A0A075B651 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-4-dv10A0A075B651 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms