Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX4Q9UIU6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX4Q9UIU6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.52■□□□□ 0.39
SIX4Q9UIU6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX4Q9UIU6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX4Q9UIU6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.52■□□□□ 0.39
SIX4Q9UIU6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 AC006449.5-201ENST00000610658 2098 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 SPDYE7P-202ENST00000420373 878 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 CNN2P2-201ENST00000443536 909 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 CNN2P3-201ENST00000450201 906 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 MIR4321-201ENST00000592276 80 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 AC106028.4-201ENST00000614509 607 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 AL136317.3-201ENST00000618497 906 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
SIX4Q9UIU6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX4Q9UIU6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.5■□□□□ 0.39
SIX4Q9UIU6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 AC003101.2-201ENST00000612557 442 ntBASIC17.5■□□□□ 0.39
SIX4Q9UIU6 AC007967.4-201ENST00000614700 386 ntBASIC17.5■□□□□ 0.39
SIX4Q9UIU6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 AC006449.6-201ENST00000612330 2296 ntBASIC17.5■□□□□ 0.39
SIX4Q9UIU6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.5■□□□□ 0.39
SIX4Q9UIU6 OR6D1P-202ENST00000641007 5290 ntBASIC17.49■□□□□ 0.39
SIX4Q9UIU6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.49■□□□□ 0.39
SIX4Q9UIU6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms