Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ift27Q9D0P8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Gm37714-201ENSMUST00000194742 342 ntBASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift27Q9D0P8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Mir698-201ENSMUST00000102164 109 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Gm13823-201ENSMUST00000119930 345 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift27Q9D0P8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms