Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 OR8B9P-201ENST00000419756 925 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 RPS6P25-201ENST00000464444 748 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC107015.1-201ENST00000466902 747 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ATG10-AS1-201ENST00000504846 648 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC097173.1-201ENST00000505862 819 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AP001960.1-201ENST00000506494 658 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 RNU6-506P-201ENST00000516553 94 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC006504.3-201ENST00000586818 523 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 pRNA.6-201ENST00000610482 90 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC245297.3-201ENST00000611769 838 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 pRNA.5-201ENST00000612139 90 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC013564.1-201ENST00000612806 707 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC091834.1-201ENST00000614543 472 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL132822.1-201ENST00000617063 513 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 pRNA.11-201ENST00000618423 90 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 pRNA.13-201ENST00000619112 90 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL390961.1-202ENST00000636744 1172 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AL049796.1-201ENST00000565336 1766 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF75BP-201ENST00000546499 1524 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 CYP24A1-202ENST00000395954 1438 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 BIN2P2-201ENST00000503900 1303 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 OR51T1-202ENST00000380378 1065 ntAPPRIS P2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 Y_RNA.554-201ENST00000384672 102 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 RN7SKP142-201ENST00000411236 328 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010141.1-201ENST00000411585 623 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 OFD1P2Y-201ENST00000421895 1149 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC007064.3-201ENST00000422608 359 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC021876.1-201ENST00000425959 359 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 SLC2A1-AS1-202ENST00000431759 1124 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 TSPY9P-201ENST00000440215 945 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 TSPY11P-201ENST00000442607 1045 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AL645474.1-201ENST00000451797 493 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 CEACAM22P-202ENST00000455058 1021 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 KLF3P2-201ENST00000465138 268 ntBASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC10.44□□□□□ -0.74
KRTAP3-3Q9BYR6 OR5BB1P-201ENST00000528843 939 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms