Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 BNIP3P1-202ENST00000550043 1585 ntBASIC19.09■□□□□ 0.65
CDK5RAP2Q96SN8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 MIR6069-201ENST00000620069 79 ntBASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.08■□□□□ 0.65
CDK5RAP2Q96SN8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP2Q96SN8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC006449.6-201ENST00000612330 2296 ntBASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 CLK3P2-201ENST00000427566 1453 ntBASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC007274.1-201ENST00000439805 662 ntBASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP2Q96SN8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AP006294.1-201ENST00000415407 339 ntBASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 GIMAP3P-201ENST00000495150 836 ntBASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 USP32P1-208ENST00000506594 1164 ntBASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AC027307.3-201ENST00000594262 1100 ntBASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP2Q96SN8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP2Q96SN8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms