Protein–RNA interactions for Protein: Q3V0X2

Cldn34b4, 4930428D18Rik protein, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b4Q3V0X2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Mir874-201ENSMUST00000104769 76 ntBASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Gm24420-201ENSMUST00000176676 59 ntBASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Mir7684-201ENSMUST00000183858 60 ntBASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn34b4Q3V0X2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cldn34b4Q3V0X2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Cldn34b4Q3V0X2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cldn34b4Q3V0X2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm15487-201ENSMUST00000122373 465 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm3436-201ENSMUST00000179930 840 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm10766-202ENSMUST00000194123 606 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Rubie-203ENSMUST00000227803 2430 ntBASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn34b4Q3V0X2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn34b4Q3V0X2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms