Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB4AP20338 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.7□□□□□ -0.38
RAB4AP20338 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB4AP20338 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 TSPY17P-201ENST00000450329 467 ntBASIC12.7□□□□□ -0.38
RAB4AP20338 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB4AP20338 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 AL353719.1-201ENST00000566847 864 ntBASIC12.7□□□□□ -0.38
RAB4AP20338 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB4AP20338 AL023803.3-201ENST00000615559 522 ntBASIC12.7□□□□□ -0.38
RAB4AP20338 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB4AP20338 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB4AP20338 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
RAB4AP20338 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RAB4AP20338 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB4AP20338 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB4AP20338 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB4AP20338 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB4AP20338 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB4AP20338 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB4AP20338 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB4AP20338 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RAB4AP20338 ESRRAP1-201ENST00000400596 1257 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 KRT18P65-201ENST00000439811 1286 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB4AP20338 C1QBPP2-201ENST00000528754 825 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.69□□□□□ -0.38
RAB4AP20338 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 CD177P1-201ENST00000606252 935 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB4AP20338 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 AC092364.2-201ENST00000596710 2692 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RAB4AP20338 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms