Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC091951.1-201ENST00000512854 2465 ntBASIC14.38□□□□□ -0.11
SHISA3A0PJX4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 AC233702.3-201ENST00000578656 1387 ntBASIC14.38□□□□□ -0.11
SHISA3A0PJX4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 VENTXP7-201ENST00000475503 772 ntBASIC14.38□□□□□ -0.11
SHISA3A0PJX4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 CYP2A7P1-201ENST00000595391 815 ntBASIC14.38□□□□□ -0.11
SHISA3A0PJX4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.37□□□□□ -0.11
SHISA3A0PJX4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 MIR1224-201ENST00000408193 85 ntBASIC14.37□□□□□ -0.11
SHISA3A0PJX4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.37□□□□□ -0.11
SHISA3A0PJX4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHISA3A0PJX4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 AC064862.7-201ENST00000604520 867 ntBASIC14.36□□□□□ -0.11
SHISA3A0PJX4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHISA3A0PJX4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms