Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm27301-201ENSMUST00000184012 127 ntBASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav7n-4A0A075B620 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Trav7n-4A0A075B620 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav7n-4A0A075B620 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms