Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sf3a1Q8K4Z5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm6745-201ENSMUST00000199216 526 ntBASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gm9908-201ENSMUST00000211534 448 ntBASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sf3a1Q8K4Z5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Gm38223-201ENSMUST00000194484 695 ntBASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sf3a1Q8K4Z5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm27701-201ENSMUST00000184498 110 ntBASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm9794-201ENSMUST00000202370 423 ntBASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sf3a1Q8K4Z5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms