Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC106886.4-201ENST00000623557 2502 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 MYCLP1-201ENST00000372451 1075 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 VN2R19P-201ENST00000442399 1052 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC002558.1-201ENST00000488906 803 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC018845.2-201ENST00000568326 409 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AP001160.2-201ENST00000596071 487 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AL805961.1-202ENST00000641562 540 ntBASIC11.01□□□□□ -0.65
SCXQ7RTU7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCXQ7RTU7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11□□□□□ -0.65
SCXQ7RTU7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 FLJ13224-201ENST00000313737 1514 ntBASIC11□□□□□ -0.65
SCXQ7RTU7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SLC9A7P1-201ENST00000554295 3311 ntBASIC11□□□□□ -0.65
SCXQ7RTU7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms