Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM1O00151 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM1O00151 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDLIM1O00151 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
PDLIM1O00151 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PDLIM1O00151 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
PDLIM1O00151 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PDLIM1O00151 AL049757.1-201ENST00000616842 1596 ntBASIC15.79■□□□□ 0.12
PDLIM1O00151 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PDLIM1O00151 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 NUS1P1-201ENST00000446295 882 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 KRT17P6-201ENST00000453795 1220 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.78■□□□□ 0.12
PDLIM1O00151 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.78■□□□□ 0.12
PDLIM1O00151 AP000867.3-201ENST00000524675 377 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 MIR3652-201ENST00000579335 131 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 AC005336.2-201ENST00000593183 939 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 CLEC4GP1-201ENST00000596555 870 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.78■□□□□ 0.12
PDLIM1O00151 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PDLIM1O00151 CR383656.2-201ENST00000548656 2254 ntBASIC15.78■□□□□ 0.12
PDLIM1O00151 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDLIM1O00151 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDLIM1O00151 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PDLIM1O00151 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PDLIM1O00151 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM1O00151 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM1O00151 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM1O00151 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.77■□□□□ 0.12
PDLIM1O00151 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.77■□□□□ 0.12
PDLIM1O00151 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM1O00151 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM1O00151 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM1O00151 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms