Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRIT2A6NDA9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 GPX1P2-201ENST00000429271 606 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 RN7SL589P-201ENST00000481268 310 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC112482.1-201ENST00000492080 688 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 YBX1P5-201ENST00000509441 847 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 PRYP6-201ENST00000514804 343 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC243562.1-201ENST00000560672 389 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 MIR3687-2-201ENST00000577708 61 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC026120.1-201ENST00000611536 926 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 MIR3687-1-201ENST00000614492 61 ntBASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRIT2A6NDA9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 U82695.1-201ENST00000635752 1889 ntBASIC15.65■□□□□ 0.1
LRIT2A6NDA9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 RPSAP43-201ENST00000402237 625 ntBASIC15.65■□□□□ 0.1
LRIT2A6NDA9 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 UPF3AP3-201ENST00000420996 769 ntBASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AL138918.1-201ENST00000568306 659 ntBASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC010327.4-202ENST00000591484 748 ntBASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRIT2A6NDA9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms