Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 LAGE3P1-201ENST00000425356 484 ntBASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 RNPS1P1-201ENST00000507437 918 ntBASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AC139887.3-201ENST00000568585 713 ntBASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AL773604.1-201ENST00000617417 272 ntBASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 GGT3P-204ENST00000453783 1664 ntBASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIN7CQ9NUP9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC004817.3-201ENST00000602957 2129 ntBASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC105917.1-201ENST00000506637 2539 ntBASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC018712.1-201ENST00000455767 687 ntBASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AL121894.2-201ENST00000602977 491 ntBASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC025062.2-201ENST00000605477 670 ntBASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms