Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC023511.2-201ENST00000618803 211 ntBASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 SPCS2P4-201ENST00000436160 681 ntBASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CISHQ9NSE2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CISHQ9NSE2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 REXO1L8P-201ENST00000604378 1897 ntBASIC17.56■□□□□ 0.4
CISHQ9NSE2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC027307.2-201ENST00000591252 911 ntBASIC17.56■□□□□ 0.4
CISHQ9NSE2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC008267.7-201ENST00000624570 1194 ntBASIC17.56■□□□□ 0.4
CISHQ9NSE2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 AC105339.1-204ENST00000636249 355 ntBASIC17.56■□□□□ 0.4
CISHQ9NSE2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CISHQ9NSE2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CISHQ9NSE2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CISHQ9NSE2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms