Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4aQ8VEJ9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Gm9908-201ENSMUST00000211534 448 ntBASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4aQ8VEJ9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4aQ8VEJ9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms