Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx54Q8K4L0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Gm5051-201ENSMUST00000204085 485 ntBASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx54Q8K4L0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx54Q8K4L0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx54Q8K4L0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm14109-201ENSMUST00000118814 309 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm44545-201ENSMUST00000208262 746 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm45770-201ENSMUST00000212105 616 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm43081-201ENSMUST00000199082 1380 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx54Q8K4L0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx54Q8K4L0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx54Q8K4L0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms