Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLX4Q8IY92 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLX4Q8IY92 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 RPL13P2-201ENST00000440687 659 ntBASIC19.75■□□□□ 0.75
SLX4Q8IY92 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SLX4Q8IY92 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLX4Q8IY92 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLX4Q8IY92 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLX4Q8IY92 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLX4Q8IY92 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 FAM86LP-201ENST00000478302 853 ntBASIC19.74■□□□□ 0.75
SLX4Q8IY92 AC106760.1-201ENST00000508690 800 ntBASIC19.74■□□□□ 0.75
SLX4Q8IY92 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 MSTO2P-201ENST00000314835 1709 ntBASIC19.74■□□□□ 0.75
SLX4Q8IY92 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 AL355864.2-201ENST00000447420 863 ntBASIC19.74■□□□□ 0.75
SLX4Q8IY92 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 AP000812.2-201ENST00000538934 718 ntBASIC19.74■□□□□ 0.75
SLX4Q8IY92 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.74■□□□□ 0.75
SLX4Q8IY92 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLX4Q8IY92 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AC068880.1-201ENST00000507289 2297 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AC074338.1-201ENST00000416825 156 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 KRT18P64-201ENST00000434946 1219 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AP001889.1-201ENST00000525414 633 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 DUX4L45-201ENST00000566406 1057 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 RN7SL560P-201ENST00000577943 264 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 MIR3615-201ENST00000581999 87 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 AC103810.3-201ENST00000583567 96 ntBASIC19.73■□□□□ 0.75
SLX4Q8IY92 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.73■□□□□ 0.75
SLX4Q8IY92 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLX4Q8IY92 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLX4Q8IY92 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 TOMM22P5-201ENST00000416399 439 ntBASIC19.72■□□□□ 0.75
SLX4Q8IY92 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.72■□□□□ 0.75
SLX4Q8IY92 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms