Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim36Q80WG7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.05□□□□□ -0.32
Trim36Q80WG7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim36Q80WG7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.04□□□□□ -0.32
Trim36Q80WG7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.04□□□□□ -0.32
Trim36Q80WG7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim36Q80WG7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms