Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC141586.5-201ENST00000624546 2050 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 AC093724.1-201ENST00000448659 1027 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 RRP7BP-205ENST00000566851 833 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.53□□□□□ -0.24
VPS13CQ709C8 MIR6727-201ENST00000620702 65 ntBASIC13.53□□□□□ -0.24
VPS13CQ709C8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VPS13CQ709C8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13CQ709C8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13CQ709C8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13CQ709C8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 AC060834.1-201ENST00000443027 2032 ntBASIC13.52□□□□□ -0.24
VPS13CQ709C8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.52□□□□□ -0.24
VPS13CQ709C8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13CQ709C8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VPS13CQ709C8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 GOLGA2P4-201ENST00000441462 777 ntBASIC13.52□□□□□ -0.25
VPS13CQ709C8 AC105129.2-201ENST00000559536 390 ntBASIC13.52□□□□□ -0.25
VPS13CQ709C8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 AC004461.2-201ENST00000629517 803 ntBASIC13.52□□□□□ -0.25
VPS13CQ709C8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.52□□□□□ -0.25
VPS13CQ709C8 AL512652.2-201ENST00000625156 1716 ntBASIC13.52□□□□□ -0.25
VPS13CQ709C8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VPS13CQ709C8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 FXNP2-201ENST00000411625 547 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 RN7SL190P-201ENST00000582519 257 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AL662844.4-201ENST00000606367 2838 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AC233724.13-201ENST00000598383 410 ntBASIC13.51□□□□□ -0.25
VPS13CQ709C8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.51□□□□□ -0.25
VPS13CQ709C8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VPS13CQ709C8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms