Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 AL844908.2-201ENST00000609461 460 ntBASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 AC087499.5-201ENST00000452760 1342 ntBASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CRB3P1-201ENST00000449338 276 ntBASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 RNA5SP410-201ENST00000516285 106 ntBASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC62Q6P9F0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 MTND6P24-201ENST00000440466 518 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AC005225.4-201ENST00000557330 545 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AL589739.1-201ENST00000607720 493 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AC020765.3-201ENST00000613051 740 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AC009118.2-201ENST00000613275 655 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 CETN4P-206ENST00000642099 2168 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 AL031731.1-201ENST00000642131 2094 ntBASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC62Q6P9F0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC62Q6P9F0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms