Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TIMM8BP1-201ENST00000452384 211 ntBASIC15.69■□□□□ 0.1
SKP1P63208 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SKP1P63208 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.69■□□□□ 0.1
SKP1P63208 KRT8P23-201ENST00000560090 1207 ntBASIC15.69■□□□□ 0.1
SKP1P63208 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.69■□□□□ 0.1
SKP1P63208 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.69■□□□□ 0.1
SKP1P63208 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.69■□□□□ 0.1
SKP1P63208 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.69■□□□□ 0.1
SKP1P63208 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SKP1P63208 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SKP1P63208 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SKP1P63208 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SKP1P63208 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 PCGF3-213ENST00000620529 1899 ntBASIC15.68■□□□□ 0.1
SKP1P63208 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.68■□□□□ 0.1
SKP1P63208 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
SKP1P63208 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.68■□□□□ 0.1
SKP1P63208 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.68■□□□□ 0.1
SKP1P63208 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SKP1P63208 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.68■□□□□ 0.1
SKP1P63208 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 GGT3P-204ENST00000453783 1664 ntBASIC15.67■□□□□ 0.1
SKP1P63208 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.67■□□□□ 0.1
SKP1P63208 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.67■□□□□ 0.1
SKP1P63208 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 ADH5P3-201ENST00000433842 1137 ntBASIC15.67■□□□□ 0.1
SKP1P63208 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 POU5F1P6-201ENST00000466990 990 ntBASIC15.67■□□□□ 0.1
SKP1P63208 AC105233.2-201ENST00000523697 349 ntBASIC15.67■□□□□ 0.1
SKP1P63208 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 AF228730.5-201ENST00000530288 346 ntBASIC15.67■□□□□ 0.1
SKP1P63208 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 SNHG9-202ENST00000564014 471 ntBASIC15.67■□□□□ 0.1
SKP1P63208 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.67■□□□□ 0.1
SKP1P63208 AC004835.2-201ENST00000603762 682 ntBASIC15.67■□□□□ 0.1
SKP1P63208 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 AC008267.7-201ENST00000624570 1194 ntBASIC15.67■□□□□ 0.1
SKP1P63208 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.67■□□□□ 0.1
SKP1P63208 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms