Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.69□□□□□ -0.22
VimP20152 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VimP20152 Gm15173-201ENSMUST00000122049 433 ntBASIC13.69□□□□□ -0.22
VimP20152 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VimP20152 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.69□□□□□ -0.22
VimP20152 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.69□□□□□ -0.22
VimP20152 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.69□□□□□ -0.22
VimP20152 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.69□□□□□ -0.22
VimP20152 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.69□□□□□ -0.22
VimP20152 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.69□□□□□ -0.22
VimP20152 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.69□□□□□ -0.22
VimP20152 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.69□□□□□ -0.22
VimP20152 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
VimP20152 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
VimP20152 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VimP20152 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Gm15957-201ENSMUST00000118893 974 ntBASIC13.68□□□□□ -0.22
VimP20152 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Gm6550-201ENSMUST00000187574 993 ntBASIC13.68□□□□□ -0.22
VimP20152 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.68□□□□□ -0.22
VimP20152 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VimP20152 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VimP20152 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VimP20152 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.67□□□□□ -0.22
VimP20152 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
VimP20152 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.67□□□□□ -0.22
VimP20152 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VimP20152 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VimP20152 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.67□□□□□ -0.22
VimP20152 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VimP20152 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VimP20152 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.67□□□□□ -0.22
VimP20152 Gm29741-201ENSMUST00000192667 421 ntBASIC13.67□□□□□ -0.22
VimP20152 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VimP20152 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VimP20152 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms