Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM38O00635 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM38O00635 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM38O00635 AC093520.2-201ENST00000561830 333 ntBASIC16.66■□□□□ 0.26
TRIM38O00635 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM38O00635 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM38O00635 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM38O00635 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 AC022188.1-201ENST00000620960 1664 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM38O00635 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 AC092171.3-201ENST00000610122 2651 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 AC093525.9-201ENST00000624961 1746 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM38O00635 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 BCRP1-201ENST00000444246 691 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM38O00635 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 AC099522.2-201ENST00000607001 744 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM38O00635 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM38O00635 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM38O00635 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRIM38O00635 AL513523.2-202ENST00000427283 2040 ntBASIC16.65■□□□□ 0.26
TRIM38O00635 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM38O00635 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM38O00635 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM38O00635 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM38O00635 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM38O00635 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM38O00635 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM38O00635 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 AL355306.1-201ENST00000415580 579 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 AL671277.1-201ENST00000429656 993 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM38O00635 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM38O00635 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 KRT8P48-201ENST00000515599 1220 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM38O00635 AC107918.2-201ENST00000530817 355 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM38O00635 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
TRIM38O00635 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.64■□□□□ 0.25
TRIM38O00635 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM38O00635 AL096865.1-201ENST00000606796 927 ntBASIC16.64■□□□□ 0.25
TRIM38O00635 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms