Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5-4A0A075B652 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Mir497b-201ENSMUST00000093601 125 ntBASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5-4A0A075B652 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav5-4A0A075B652 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav5-4A0A075B652 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms