Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CDCA3Q99618 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDCA3Q99618 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDCA3Q99618 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17■□□□□ 0.31
CDCA3Q99618 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17■□□□□ 0.31
CDCA3Q99618 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17■□□□□ 0.31
CDCA3Q99618 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17■□□□□ 0.31
CDCA3Q99618 KRT8P22-201ENST00000562317 1415 ntBASIC17■□□□□ 0.31
CDCA3Q99618 CYP4F24P-201ENST00000586049 1580 ntBASIC17■□□□□ 0.31
CDCA3Q99618 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17■□□□□ 0.31
CDCA3Q99618 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17■□□□□ 0.31
CDCA3Q99618 AC133539.2-201ENST00000604757 467 ntBASIC17■□□□□ 0.31
CDCA3Q99618 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17■□□□□ 0.31
CDCA3Q99618 AL022328.1-201ENST00000610050 478 ntBASIC17■□□□□ 0.31
CDCA3Q99618 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17■□□□□ 0.31
CDCA3Q99618 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDCA3Q99618 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDCA3Q99618 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDCA3Q99618 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 ACTG1P3-201ENST00000431775 1114 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.99■□□□□ 0.31
CDCA3Q99618 AL583810.1-201ENST00000553344 1045 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 MIR4538-201ENST00000581377 78 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 RN7SL219P-201ENST00000582872 296 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.99■□□□□ 0.31
CDCA3Q99618 MIR4321-201ENST00000592276 80 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 MIR6869-201ENST00000619434 62 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.99■□□□□ 0.31
CDCA3Q99618 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDCA3Q99618 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDCA3Q99618 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDCA3Q99618 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDCA3Q99618 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
CDCA3Q99618 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDCA3Q99618 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 TUBB1P2-201ENST00000422712 1306 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 TUBB1P1-201ENST00000503144 1300 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 AL031731.1-201ENST00000642131 2094 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 AC087289.5-201ENST00000586076 3175 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 CROCCP2-202ENST00000412962 2773 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.98■□□□□ 0.31
CDCA3Q99618 CTBP2P5-201ENST00000454986 1264 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.98■□□□□ 0.31
CDCA3Q99618 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDCA3Q99618 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDCA3Q99618 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.98■□□□□ 0.31
CDCA3Q99618 AL391069.4-201ENST00000609583 481 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 MIR6787-201ENST00000616675 61 ntBASIC16.98■□□□□ 0.31
CDCA3Q99618 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms